From Fig. Authors Then, using an enhanced version of Marine Predators Algorithm to select only relevant features. Brain tumor segmentation with deep neural networks. The evaluation confirmed that FPA based FS enhanced classification accuracy. All classication models ever, the virus mutates, and new variants emerge and dis- performed better in classifying the Non-COVID-19 images appear. In this paper, we apply a convolutional neural network (CNN) to extract features from COVID-19 X-Ray images. Classification of Covid-19 X-Ray Images Using Fuzzy Gabor Filter and volume10, Articlenumber:15364 (2020) 78, 2091320933 (2019). New machine learning method for image-based diagnosis of COVID-19 - PLOS & Wang, W. Medical image segmentation using fruit fly optimization and density peaks clustering. Eur. Acharya, U. R. et al. Corona Virus lung infected X-Ray Images accessible by Kaggle a complete 590 images, which classified in 2 classes: typical and Covid-19. Syst. 111, 300323. Fung, G. & Stoeckel, J. Svm feature selection for classification of spect images of alzheimers disease using spatial information. (2) calculated two child nodes. Eng. A comprehensive study on classification of COVID-19 on - PubMed Contribute to hellorp1990/Covid-19-USF development by creating an account on GitHub. Netw. In 2018 IEEE International Symposium on Circuits and Systems (ISCAS), 15 (IEEE, 2018). 2020-09-21 . A joint segmentation and classification framework for COVID19 \(r_1\) and \(r_2\) are the random index of the prey. Aiming at the problems of poor attention to existing translation models, the insufficient ability of key transfer and generation, insufficient quality of generated images, and lack of detailed features, this paper conducts research on lung medical image translation and lung image classification based on . what medical images are commonly used for COVID-19 classification and what are the methods for COVID-19 classification. Stage 2: The prey/predator in this stage begin exploiting the best location that detects for their foods. Also, they require a lot of computational resources (memory & storage) for building & training. 198 (Elsevier, Amsterdam, 1998). It also contributes to minimizing resource consumption which consequently, reduces the processing time. If you find something abusive or that does not comply with our terms or guidelines please flag it as inappropriate. Marine memory: This is the main feature of the marine predators and it helps in catching the optimal solution very fast and avoid local solutions. Regarding the consuming time as in Fig. Classification and visual explanation for COVID-19 pneumonia from CT Lilang Zheng, Jiaxuan Fang, Xiaorun Tang, Hanzhang Li, Jiaxin Fan, Tianyi Wang, Rui Zhou, Zhaoyan Yan: PVT-COV19D: COVID-19 Detection Through Medical Image Classification Based on Pyramid Vision Transformer. The Shearlet transform FS method showed better performances compared to several FS methods. where \(ni_{j}\) is the importance of node j, while \(w_{j}\) refers to the weighted number of samples reaches the node j, also \(C_{j}\) determines the impurity value of node j. left(j) and right(j) are the child nodes from the left split and the right split on node j, respectively. The accuracy measure is used in the classification phase. Image Classification With ResNet50 Convolution Neural Network - Medium Faramarzi et al.37 divided the agents for two halves and formulated Eqs. 25, 3340 (2015). Meanwhile, the prey moves effectively based on its memory for the previous events to catch its food, as presented in Eq. \end{aligned}$$, $$\begin{aligned} U_i(t+1)-U_i(t)=P.R\bigotimes S_i \end{aligned}$$, $$\begin{aligned} D ^{\delta } \left[ U_{i}(t+1)\right] =P.R\bigotimes S_i \end{aligned}$$, $$D^{\delta } \left[ {U_{i} (t + 1)} \right] = U_{i} (t + 1) + \sum\limits_{{k = 1}}^{m} {\frac{{( - 1)^{k} \Gamma (\delta + 1)U_{i} (t + 1 - k)}}{{\Gamma (k + 1)\Gamma (\delta - k + 1)}}} = P \cdot R \otimes S_{i} .$$, $$\begin{aligned} \begin{aligned} U(t+1)_{i}= - \sum _{k=1}^{m} \frac{(-1)^k\Gamma (\delta +1)U_{i}(t+1-k)}{\Gamma (k+1)\Gamma (\delta -k+1)} + P.R\bigotimes S_i. In 2019 26th National and 4th International Iranian Conference on Biomedical Engineering (ICBME), 194198 (IEEE, 2019). COVID-19 image classification using deep features and fractional-order Also, in58 a new CNN architecture called EfficientNet was proposed, where more blocks were added on top of the model after applying normalization of images pixels intensity to the range (0 to 1). Coronavirus Disease (COVID-19): A primer for emergency physicians (2020) Summer Chavez et al. Whereas, FO-MPA, MPA, HGSO, and WOA showed similar STD results. Classification of COVID19 using Chest X-ray Images in Keras - Coursera Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations. The two datasets consist of X-ray COVID-19 images by international Cardiothoracic radiologist, researchers and others published on Kaggle. We can call this Task 2. Li et al.34 proposed a self-adaptive bat algorithm (BA) to address two problems in lung X-ray images, rebalancing, and feature selection. 2 (left). We adopt a special type of CNN called a pre-trained model where the network is previously trained on the ImageNet dataset, which contains millions of variety of images (animal, plants, transports, objects,..) on 1000 classe categories. For this motivation, we utilize the FC concept with the MPA algorithm to boost the second step of the standard version of the algorithm. Background The large volume and suboptimal image quality of portable chest X-rays (CXRs) as a result of the COVID-19 pandemic could post significant challenges for radiologists and frontline physicians. However, the proposed IMF approach achieved the best results among the compared algorithms in least time. Comput. }\delta (1-\delta )(2-\delta )(3-\delta ) U_{i}(t-3) + P.R\bigotimes S_i. In this subsection, a comparison with relevant works is discussed. Thank you for visiting nature.com. Its structure is designed based on experts' knowledge and real medical process. Also, because COVID-19 is a virus, distinguish COVID-19 from common viral . Figure5, shows that FO-MPA shows an efficient and faster convergence than the other optimization algorithms on both datasets. & Dai, Q. Discriminative clustering and feature selection for brain mri segmentation. Chollet, F. Keras, a python deep learning library. Phys. However, it was clear that VGG19 and MobileNet achieved the best performance over other CNNs. Machine Learning Performances for Covid-19 Images Classification based Objective: To help improve radiologists' efficacy of disease diagnosis in reading computed tomography (CT) images, this study aims to investigate the feasibility of applying a modified deep learning (DL) method as a new strategy to automatically segment disease-infected regions and predict disease severity. They also used the SVM to classify lung CT images. In Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 19 (2015). The results showed that the proposed approach showed better performances in both classification accuracy and the number of extracted features that positively affect resource consumption and storage efficiency. For each of these three categories, there is a number of patients and for each of them, there is a number of CT scan images correspondingly. Moreover, from Table4, it can be seen that the proposed FO-MPA provides better results in terms of F-Score, as it has the highest value in datatset1 and datatset2 which are 0.9821 and 0.99079, respectively. A. Also, it has killed more than 376,000 (up to 2 June 2020) [Coronavirus disease (COVID-2019) situation reports: (https://www.who.int/emergencies/diseases/novel-coronavirus-2019/situation-reports/)]. In14, the authors proposed an FS method based on a convolutional neural network (CNN) to detect pneumonia from lung X-ray images. Using the best performing fine-tuned VGG-16 DTL model, tests were carried out on 470 unlabeled image dataset, which was not used in the model training and validation processes. Springer Science and Business Media LLC Online. Syst. Toaar, M., Ergen, B. In transfer learning, a CNN which was previously trained on a large & diverse image dataset can be applied to perform a specific classification task by23. Sci. Pool layers are used mainly to reduce the inputs size, which accelerates the computation as well. A CNN-transformer fusion network for COVID-19 CXR image classification Finally, the sum of the features importance value on each tree is calculated then divided by the total number of trees as in Eq. HIGHLIGHTS who: Yuan Jian and Qin Xiao from the Fukuoka University, Japan have published the Article: Research and Application of Fine-Grained Image Classification Based on Small Collar Dataset, in the Journal: (JOURNAL) what: MC-Loss drills down on the channels to effectively navigate the model, focusing on different distinguishing regions and highlighting diverse features. \end{aligned} \end{aligned}$$, $$\begin{aligned} WF(x)=\exp ^{\left( {\frac{x}{k}}\right) ^\zeta } \end{aligned}$$, $$\begin{aligned}&Accuracy = \frac{\text {TP} + \text {TN}}{\text {TP} + \text {TN} + \text {FP} + \text {FN}} \end{aligned}$$, $$\begin{aligned}&Sensitivity = \frac{\text {TP}}{\text{ TP } + \text {FN}}\end{aligned}$$, $$\begin{aligned}&Specificity = \frac{\text {TN}}{\text {TN} + \text {FP}}\end{aligned}$$, $$\begin{aligned}&F_{Score} = 2\times \frac{\text {Specificity} \times \text {Sensitivity}}{\text {Specificity} + \text {Sensitivity}} \end{aligned}$$, $$\begin{aligned} Best_{acc} = \max _{1 \le i\le {r}} Accuracy \end{aligned}$$, $$\begin{aligned} Best_{Fit_i} = \min _{1 \le i\le r} Fit_i \end{aligned}$$, $$\begin{aligned} Max_{Fit_i} = \max _{1 \le i\le r} Fit_i \end{aligned}$$, $$\begin{aligned} \mu = \frac{1}{r} \sum _{i=1}^N Fit_i \end{aligned}$$, $$\begin{aligned} STD = \sqrt{\frac{1}{r-1}\sum _{i=1}^{r}{(Fit_i-\mu )^2}} \end{aligned}$$, https://doi.org/10.1038/s41598-020-71294-2. Med. PubMedGoogle Scholar. This algorithm is tested over a global optimization problem. Besides, the used statistical operations improve the performance of the FO-MPA algorithm because it supports the algorithm in selecting only the most important and relevant features. Acharya et al.11 applied different FS methods to classify Alzheimers disease using MRI images. For the exploration stage, the weibull distribution has been applied rather than Brownian to bost the performance of the predator in stage 2 and the prey velocity in stage 1 based on the following formula: Where k, and \(\zeta\) are the scale and shape parameters. Classification of COVID-19 X-ray images with Keras and its - Medium Propose similarity regularization for improving C. It is calculated between each feature for all classes, as in Eq. and M.A.A.A. Our method is able to classify pneumonia from COVID-19 and visualize an abnormal area at the same time. Eng. In general, MPA is a meta-heuristic technique that simulates the behavior of the prey and predator in nature37. Book Lilang Zheng, Jiaxuan Fang, Xiaorun Tang, Hanzhang Li, Jiaxin Fan, Tianyi Wang, Rui Zhou, Zhaoyan Yan. \(\Gamma (t)\) indicates gamma function. Accordingly, the prey position is upgraded based the following equations. Average of the consuming time and the number of selected features in both datasets. Appl. A properly trained CNN requires a lot of data and CPU/GPU time. Moreover, the Weibull distribution employed to modify the exploration function. J. Med. Abbas, A., Abdelsamea, M.M. & Gaber, M.M. Classification of covid-19 in chest x-ray images using detrac deep convolutional neural network. Since its structure consists of some parallel paths, all the paths use padding of 1 pixel to preserve the same height & width for the inputs and the outputs. In9, to classify ultrasound medical images, the authors used distance-based FS methods and a Fuzzy Support Vector Machine (FSVM). Al-qaness, M. A., Ewees, A. In Eq. According to the formula10, the initial locations of the prey and predator can be defined as below: where the Elite matrix refers to the fittest predators. (15) can be reformulated to meet the special case of GL definition of Eq. 11314, 113142S (International Society for Optics and Photonics, 2020). Johnson et al.31 applied the flower pollination algorithm (FPA) to select features from CT images of the lung, to detect lung cancers. Mobilenets: Efficient convolutional neural networks for mobile vision applications. They applied the SVM classifier with and without RDFS. Highlights COVID-19 CT classification using chest tomography (CT) images. CAS Fractional-order calculus (FC) gains the interest of many researchers in different fields not only in the modeling sectors but also in developing the optimization algorithms. In this paper, we try to integrate deep transfer-learning-based methods, along with a convolutional block attention module (CBAM), to focus on the relevant portion of the feature maps to conduct an image-based classification of human monkeypox disease. Eq. To segment brain tissues from MRI images, Kong et al.17 proposed an FS method using two methods, called a discriminative clustering method and the information theoretic discriminative segmentation. 79, 18839 (2020). In our experiment, we randomly split the data into 70%, 10%, and 20% for training, validation, and testing sets, respectively. Zhu, H., He, H., Xu, J., Fang, Q. Computer Vision - ECCV 2020 16th European Conference, Glasgow, UK The predator tries to catch the prey while the prey exploits the locations of its food. In this paper, each feature selection algorithm were exposed to select the produced feature vector from Inception aiming at selecting only the most relevant features. For diagnosing COVID-19, the RT-PCR (real-time polymerase chain reaction) is a standard diagnostic test, but, it can be considered as a time-consuming test, more so, it also suffers from false negative diagnosing4. The dataset consists of 21,165 chest X-ray (CXR) COVID-19 images distributed on four categories which are COVID19, lung opacity, viral pneumonia, and NORMAL (Non-COVID). Biol. Table3 shows the numerical results of the feature selection phase for both datasets. Dr. Usama Ijaz Bajwa na LinkedIn: #efficientnet #braintumor #mri (23), the general formulation for the solutions of FO-MPA based on FC memory perspective can be written as follows: After checking the previous formula, it can be detected that the motion of the prey becomes based on some terms from the previous solutions with a length of (m), as depicted in Fig. Semi-supervised Learning for COVID-19 Image Classification via ResNet Zhang et al.16 proposed a kernel feature selection method to segment brain tumors from MRI images. This study aims to improve the COVID-19 X-ray image classification using feature selection technique by the regression mutual information deep convolution neuron networks (RMI Deep-CNNs). Li, S., Chen, H., Wang, M., Heidari, A. Decis. Vis. Dual feature selection and rebalancing strategy using metaheuristic optimization algorithms in x-ray image datasets. One of the drawbacks of pre-trained models, such as Inception, is that its architecture required large memory requirements as well as storage capacity (92 M.B), which makes deployment exhausting and a tiresome task. Covid-19 dataset. (4). FCM reinforces the ANFIS classification learning phase based on the features of COVID-19 patients. TOKYO, Jan 26 (Reuters) - Japan is set to downgrade its classification of COVID-19 to that of a less serious disease on May 8, revising its measures against the coronavirus such as relaxing. is applied before larger sized kernels are applied to reduce the dimension of the channels, which accordingly, reduces the computation cost. Imaging 35, 144157 (2015). COVID-19 image classification using deep features and fractional-order marine predators algorithm Authors. The proposed approach was evaluated on two public COVID-19 X-ray datasets which achieves both high performance and reduction of computational complexity. Test the proposed Inception Fractional-order Marine Predators Algorithm (IFM) approach on two publicity available datasets contain a number of positive negative chest X-ray scan images of COVID-19. Etymology. Accordingly, the FC is an efficient tool for enhancing the performance of the meta-heuristic algorithms by considering the memory perspective during updating the solutions. For example, Lambin et al.7 proposed an efficient approach called Radiomics to extract medical image features. While no feature selection was applied to select best features or to reduce model complexity. PubMed ISSN 2045-2322 (online). Heidari, A. Chong, D. Y. et al. Therefore in MPA, for the first third of the total iterations, i.e., \(\frac{1}{3}t_{max}\)). https://www.sirm.org/category/senza-categoria/covid-19/ (2020). The first one, dataset 1 was collected by Joseph Paul Cohen and Paul Morrison and Lan Dao42, where some COVID-19 images were collected by an Italian Cardiothoracic radiologist. . Convolutional neural networks were implemented in Python 3 under Google Colaboratory46, commonly referred to as Google Colab, which is a research project for prototyping machine learning models on powerful hardware options such as GPUs and TPUs. Tree based classifier are the most popular method to calculate feature importance to improve the classification since they have high accuracy, robustness, and simple38. A systematic literature review of machine learning application in COVID Kong, Y., Deng, Y. Nguyen, L.D., Lin, D., Lin, Z. The name "pangolin" comes from the Malay word pengguling meaning "one who rolls up" from guling or giling "to roll"; it was used for the Sunda pangolin (Manis javanica). Image Anal. If material is not included in the article's Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. The family of coronaviruses is considered serious pathogens for people because they infect respiratory, hepatic, gastrointestinal, and neurologic diseases. Recently, a combination between the fractional calculus tool and the meta-heuristics opens new doors in providing robust and reliable variants41. Continuing on my commitment to share small but interesting things in Google Cloud, this time I created a model for a Then the best solutions are reached which determine the optimal/relevant features that should be used to address the desired output via several performance measures. Eng. However, the proposed FO-MPA approach has an advantage in performance compared to other works. Access through your institution. Although the performance of the MPA and bGWO was slightly similar, the performance of SGA and WOA were the worst in both max and min measures. Scientific Reports Volume 10, Issue 1, Pages - Publisher. The Weibull Distribution is a heavy-tied distribution which presented as in Fig. Our results indicate that the VGG16 method outperforms . Classification of COVID19 using Chest X-ray Images in Keras 4.6 33 ratings Share Offered By In this Guided Project, you will: Learn to Build and Train the Convolutional Neural Network using Keras with Tensorflow as Backend Learn to Visualize Data in Matplotlib Learn to make use of the Trained Model to Predict on a New Set of Data 2 hours According to the promising results of the proposed model, that combines CNN as a feature extractor and FO-MPA as a feature selector could be useful and might be successful in being applied in other image classification tasks. Computational image analysis techniques play a vital role in disease treatment and diagnosis. In this paper, we proposed a novel COVID-19 X-ray classification approach, which combines a CNN as a sufficient tool to extract features from COVID-19 X-ray images. We are hiring! & Carlsson, S. Cnn features off-the-shelf: an astounding baseline for recognition. Reju Pillai on LinkedIn: Multi-label image classification (face They are distributed among people, bats, mice, birds, livestock, and other animals1,2. }\delta (1-\delta ) U_{i}(t-1)+ \frac{1}{3! (8) can be remodeled as below: where \(D^1[x(t)]\) represents the difference between the two followed events. Based on54, the later step reduces the memory requirements, and improve the efficiency of the framework. 2 (right). Image Underst. The proposed IFM approach is summarized as follows: Extracting deep features from Inception, where about 51 K features were extracted. Nevertheless, a common mistake in COVID-19 dataset fusion, mainly on classification tasks, is that by mixing many datasets of COVID-19 and using as Control images another dataset, there will be . The lowest accuracy was obtained by HGSO in both measures. Thereafter, the FO-MPA parameters are applied to update the solutions of the current population. So, there might be sometimes some conflict issues regarding the features vector file types or issues related to storage capacity and file transferring. Multimedia Tools Appl. One of the main disadvantages of our approach is that its built basically within two different environments. MPA simulates the main aim for most creatures that is searching for their foods, where a predator contiguously searches for food as well as the prey. Litjens, G. et al. Feature selection using flower pollination optimization to diagnose lung cancer from ct images. In this paper, we propose an improved hybrid classification approach for COVID-19 images by combining the strengths of CNNs (using a powerful architecture called Inception) to extract features and a swarm-based feature selection algorithm (Marine Predators Algorithm) to select the most relevant features. Chollet, F. Xception: Deep learning with depthwise separable convolutions. So, transfer learning is applied by transferring weights that were already learned and reserved into the structure of the pre-trained model, such as Inception, in this paper. Yousri, D. & Mirjalili, S. Fractional-order cuckoo search algorithm for parameter identification of the fractional-order chaotic, chaotic with noise and hyper-chaotic financial systems. In this work, we have used four transfer learning models, VGG16, InceptionV3, ResNet50, and DenseNet121 for the classification tasks. The classification accuracy of MPA, WOA, SCA, and SGA are almost the same. Among the FS methods, the metaheuristic techniques have been established their performance overall other FS methods when applied to classify medical images. Faramarzi et al.37 implement this feature via saving the previous best solutions of a prior iteration, and compared with the current ones; the solutions are modified based on the best one during the comparison stage. Luz, E., Silva, P.L., Silva, R. & Moreira, G. Towards an efficient deep learning model for covid-19 patterns detection in x-ray images. Cancer 48, 441446 (2012). As Inception examines all X-ray images over and over again in each epoch during the training, these rapid ups and downs are slowly minimized in the later part of the training. (iii) To implement machine learning classifiers for classification of COVID and non-COVID image classes. Future Gener. Besides, the binary classification between two classes of COVID-19 and normal chest X-ray is proposed. In our example the possible classifications are covid, normal and pneumonia. The first one is based on Python, where the deep neural network architecture (Inception) was built and the feature extraction part was performed. (9) as follows. The variants of concern are Alpha, Beta, Gamma, and than the COVID-19 images. The whale optimization algorithm. Sci. The proposed approach selected successfully 130 and 86 out of 51 K features extracted by inception from dataset 1 and dataset 2, while improving classification accuracy at the same time. Initialization phase: this phase devotes for providing a random set of solutions for both the prey and predator via the following formulas: where the Lower and Upper are the lower and upper boundaries in the search space, \(rand_1\) is a random vector \(\in\) the interval of (0,1). Med. However, the modern name is tenggiling.In Javanese it is terenggiling; and in the Philippine languages, it is goling, tanggiling, or balintong (with the same meaning).. where CF is the parameter that controls the step size of movement for the predator. Bibliographic details on CECT: Controllable Ensemble CNN and Transformer for COVID-19 image classification by capturing both local and global image features. With the help of numerous algorithms in AI, modern COVID-19 cases can be detected and managed in a classified framework. used a dark Covid-19 network for multiple classification experiments on Covid-19 with an accuracy of 87% [ 23 ]. Comput. Image segmentation is a necessary image processing task that applied to discriminate region of interests (ROIs) from the area of outsides. Finally, the predator follows the levy flight distribution to exploit its prey location. Deep Learning Based Image Classification of Lungs Radiography for where \(R_L\) has random numbers that follow Lvy distribution. The following stage was to apply Delta variants. Zhang, N., Ruan, S., Lebonvallet, S., Liao, Q. Med. To survey the hypothesis accuracy of the models. Robertas Damasevicius. In Table4, for Dataset 1, the proposed FO-MPA approach achieved the highest accuracy in the best and mean measures, as it reached 98.7%, and 97.2% of correctly classified samples, respectively. International Conference on Machine Learning647655 (2014). Refresh the page, check Medium 's site status, or find something interesting. The announcement confirmed that from May 8, following Japan's Golden Week holiday period, COVID-19 will be officially downgraded to Class 5, putting the virus on the same classification level as seasonal influenza. Sahlol, A.T., Yousri, D., Ewees, A.A. et al. Negative COVID-19 images were collected from another Chest X-ray Kaggle published dataset43. As seen in Table1, we keep the last concatenation layer which contains the extracted features, so we removed the top layers such as the Flatten, Drop out and the Dense layers which the later performs classification (named as FC layer). It also shows that FO-MPA can select the smallest subset of features, which reflects positively on performance. 2. JMIR Formative Research - Classifying COVID-19 Patients From Chest X-ray Images Using Hybrid Machine Learning Techniques: Development and Evaluation Published on 28.2.2023 in Vol 7 (2023) Preprints (earlier versions) of this paper are available at https://preprints.jmir.org/preprint/42324, first published August 31, 2022 . For example, Da Silva et al.30 used the genetic algorithm (GA) to develop feature selection methods for ranking the quality of medical images. For each decision tree, node importance is calculated using Gini importance, Eq. COVID-19 Detection via Image Classification using Deep Learning on Imaging Syst. chest X-ray images into three classes of COVID-19, normal chest X-ray and other lung diseases. Early diagnosis, timely treatment, and proper confinement of the infected patients are some possible ways to control the spreading of .

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